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althonos
pyhmmer

Cython bindings and Python interface to HMMER3.

3.2M 162 17
thewhaleking
cyscale

Cython SCALE-Codec

191K 0 0
tarasko
picows

Ultra-fast websocket client and server for asyncio

57K 265 18
althonos
pyfamsa

Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.

18K 41 4
althonos
pyopal

Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.

18K 10 1
MrTarantoga
mdl-density-histogram

Cython-accelerated MDL histogram density estimation. Implements Kontkanen & Myllymaki's dynamic programming algorithm for optimal variable-width bins, parametric complexity with Ramanujan approximations, and automatic bin count selection. Based on "MDL Histogram Density Estimation" (JMLR 2007).

18K 4 0
shBLOCK
gdmath

🚀Spatium: a fast python spatial math library

11K 8 0
cyndilib
cyndilib

A Python wrapper for Newtek NDI® written in Cython

11K 41 5
minhtuan221
cython-npm

Cython project management like npm in nodejs

8K 7 1
althonos
pytantan

Cython bindings and Python interface to Tantan, a fast method for identifying repeats in DNA and protein sequences.

6K 3 0
althonos
pyfastani

Cython bindings and Python interface to FastANI, a method for fast whole-genome similarity estimation.

5K 24 2
althonos
pymemesuite

Cython bindings and Python interface to the MEME suite, a collection of tools for the analysis of sequence motifs.

3K 17 0
Z4JC
ugrapheme

Unicode 16.0 Extended grapheme clusters in nanoseconds

2K 38 2
shBLOCK
spatium

🚀Spatium: a fast python spatial math library

2K 8 0
abdoohossamm
djcompiler

django compiler that compiles django project to a C language using Cython project which gives more performance and more security since the original code is hidden.

808 73 10
althonos
pyncbitk

Cython bindings and Python interface to the NCBI C++ ToolKit (including BLAST+).

730 11 0
althonos
pyncbitk-runtime

Cython bindings and Python interface to the NCBI C++ ToolKit (including BLAST+).

617 11 0
TexZK
cbytesparse

Library to handle sparse bytes within a virtual memory space.

587 2 1
FedericoStra
cython-package-example

Example of a package with Cython extensions

164 60 7
althonos
pyhmmer-arm

Cython bindings and Python interface to HMMER3.

106 162 17
American-Best-Technologies-Company
faster-os

Up to 6700% faster OS module.

85 18 2
Chicoryn
cb85

Cythonized Base85 encoder and decoder

65 0 1
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