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zqfang
gseapy

Gene Set Enrichment Analysis in Python

196K 696 136
scverse
decoupler

Python package to perform enrichment analysis from omics data.

49K 267 36
pachterlab
gget

🧬 gget enables efficient querying of genomic reference databases

38K 1K 85
DBRetina
dbretina

DBRetina Python Package

4K 1 3
stracquadaniolab
pygna

A Python package for gene network analysis

1K 33 6
harryhaller001
keggtools

Enrichment analysis and visualisation toolkit for KEGG pathways

761 19 3
gero-science
ct-validation

Benchmarking gene-indication evidence against clinical trial outcomes

520 0 0
qwerty239qwe
biodbs

Unified Python interface for biological databases

467 1 1
JLSteenwyk
gokit

Command-line toolkit for GO enrichment analysis

411 8 0
jsmccabe1
sceptr-profiling

Statistical Characterisation of Expression Profiles in Transcriptomes

347 4 0
dbespiatykh
gopiscator

GOpiscator is a command-line tool for performing gene set enrichment analysis using the Gene Ontology (GO) database.

257 0 0
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