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metawards
metawards

MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling

2K 14 6
lisphilar
covsirphy

CovsirPhy: Python library for COVID-19 analysis with phase-dependent SIR-derived ODE models.

2K 111 44
ryansmcgee
seirsplus

Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.

2K 675 220
lueckem
sponet

Spreading Processes on Networks

919 4 2
rajeshrinet
pyross

PyRoss: inference, forecasts, and optimised control of epidemiological models in Python. github.com/rajeshrinet/pyross

820 166 57
DataForScience
epidemik

Compartmental Epidemic Models in Python

337 14 2
QuanticPony
compartmental

Vectored GPU based compartmental simulations. Easy to use. With some ABC (Approximate Bayesian Computation) utils

209 0 0
healthbadge
episimmer

Epidemic Simulation Platform

179 16 3
lueckem
cnvm

Continuous-time noisy voter model

167 0 0
nwlandry
hypercontagion

Library for epidemics on hypergraphs

137 13 3