Fair Data Python Packages

schemasheets

Structure your data in a FAIR way using google sheets or TSVs. These are then converted to LinkML, and from there other formats

10K 52 5

oxbow

Oxbow makes genomic data ready for high-performance analytics.

9K 153 15

nmdc-schema

National Microbiome Data Collaborative (NMDC) unified data model

8K 46 10

nanopub

Python client for searching, publishing and modifying nanopublications.

4K 32 12

arctrl

Polyglot (.NET/JS/Python) library for management of Annotated Research Contexts (ARCs) using an in-memory representation and runtime-agnostic contract systems.

4K 19 10

seedcase-sprout

Grow structured, organised, and FAIR data

2K 0 1

dtool-lookup-api

Python client API for communicating with dserver.

2K 1 0

pyelli

An open source ellipsometry analysis tool for reproducible and comprehensible building of optical models.

2K 36 14

provo

PROV-O API for Python

1K 5 0

damast

damast: A Python library to facilitate the creation of reproducible data processing pipelines and usage of FAIR data

1K 1 1

fairdatanow

Experimental Python package to support working with data from our Nextcloud server

887 0 1

epyr-tools

Professional Python toolkit for EPR spectroscopy data analysis. Load Bruker files, apply baseline correction, analyze lineshapes, and convert to FAIR formats. Complete CLI suite with comprehensive testing.

657 4 2

dtool-lookup-gui

Graphical user interface for dtool

568 9 2

gimie

Extract linked metadata from repositories

531 14 2

marimba

A Python framework for structuring, processing, packaging and distributing FAIR scientific image datasets

493 19 4

fair-test

☑️ A library to build and deploy FAIR metrics tests APIs that can be used by FAIR evaluation services supporting the FAIRMetrics specifications, such as FAIR enough and the FAIR evaluator.

459 8 2