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rjdkmr
gcmapexplorer

Genome Contact Map Explorer - gcMapExplorer. Visit:

3K 21 9
ArpiarSaundersLab
annsql

The AnnSQL package enables SQL based queries on AnnData objects.

1K 41 2
michaelgruenstaeudl
airpg

A package to automatically access the inverted repeats of archived plastid genomes

1K 4 1
bobeobibo
phigaro

Phigaro is a scalable command-line tool for predicting phages and prophages

1K 52 15
xinglab-ai
genomap

Cartography of Genomic Interactions Enables Deep Analysis of Single-Cell Expression Data (Nature Communications, 2023)

963 19 5
kishwarshafin
helen

H.E.L.E.N. (Homopolymer Encoded Long-read Error-corrector for Nanopore)

734 73 12
FunctionLab
selene-sdk

a framework for training sequence-level deep learning networks

539 399 91
ikergarcia1996
gene2tab

This script is used to convert the output of ABRICATE tabulated output into a matrix samples with the genes as columns and the presence/absence of the gene as the values.

286 0 0
mt1022
gppy

[G]enomic [P]ositioning with [Py]thon

225 14 2
cellular-genomics
firecaller

FIREcaller: Python library for detecting Frequently Interacting REgions (FIREs) from Hi-C data

121 5 1
ccneko
omacase

an open-source (GPLv3) standalone Python package to analyze optical mapping data, with de novo repeat motif detection and analysis capabilities

68 2 0
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