Healthcare Python Packages

fhir-resources

FHIR Resources https://www.hl7.org/fhir/resourcelist.html

1.1M 522 120

icd10-cm

ICD-10 CM medical classification list by the World Health Organization

17K 95 26

pyhealth

A Deep Learning Python Toolkit for Healthcare Applications.

12K 2K 769

meds-reader

A high-performance database and Python reader interface for MEDS datasets

8K 20 1

pytrials

Python package that wraps around the ClinicalTrials.gov API

6K 60 20

medpython

Medial EarlySign Python

5K 4 0

omophub

Python SDK for OMOP/OHDSI vocabularies - query 10M+ medical concepts across SNOMED, ICD-10, RxNorm, LOINC & 90+ terminologies via simple API

4K 4 2

pysof

The Helios FHIR Server is an implementation of the HL7® FHIR® standard, built in Rust for high performance and optimized for clinical analytics workloads.

4K 31 7

pycyclops

A toolkit for evaluating and monitoring AI models in clinical settings

3K 91 16

stepcount

Improved Step Counting via Foundation Models for Wrist-Worn Accelerometers

3K 53 15

hi-ml-azure

Microsoft Health Futures package to elevate and monitor scripts to an AzureML workspace

2K 309 61

healthchain

Python SDK for healthcare AI: connect models to live EHR systems, skip the integration tax 💫 🏥

2K 193 36

hl7parser

a simple hl7-parser

2K 13 8

actinet

An activity classification model based on self-supervised learning for wrist-worn accelerometer data.

2K 12 3

fhirpath

FHIRPath implementation in Python.

2K 34 7

fuse-med-ml

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

2K 158 40

hi-ml

HI-ML toolbox for deep learning for medical imaging and Azure integration

2K 309 61

fhir-pyrate

FHIR-PYrate is a package that provides a high-level API to query FHIR Servers for bundles of resources and return the structured information as pandas DataFrames. It can also be used to filter resources using RegEx and SpaCy and download DICOM studies and series.

2K 79 16