PyPI Stats
  • Insights
  • PyPI
  • GitHub
  • Search
  • Compare
  • Advisories
  • Ecosystem
  • About
Home

Search Packages

Find Python packages by name, description, GitHub topic, or filter by metrics
pyranges
ncls

NCLS. Basically a static interval-tree that is silly fast for both construction and lookups. Deprecated but maintained.

82K 223 24
deeptools
deeptoolsintervals

A python library for constructing interval trees with associated exon/annotation information

9K 6 2
kylessmith
ailist

Augmented Interval Tree implemented in Cython/C

2K 20 1
mikpom
rbi-tree

Cython-wrapped C++ red-black interval tree implementation

246 0 0
konstantint
pyintervaltree

A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.

226 3 1
konstantint
intervaltree-bio

Interval tree convenience classes for genomic data

131 7 7
cool-pot
pytrees

python3 implementation of trees. Including AVL Tree, Interval Tree and More.

77 9 6
drsuuzzz
murphy

Generic tools to support parsing gtf/gff files and identifying overlapping genomic regions

57 0 1
bm371613
slice-aggregator

A library for aggregating values assigned to indices by slices and the other way around

56 1 0
    • Data from PyPI, GitHub, ClickHouse, and BigQuery