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MatthewRalston
kmerdb

Yet another k-mer counter for Genomics, Metagenomics, and Phylogenomics applications...

2K 13 1
microbial-pangenomes-lab
panfeed

A k-mer counter that streams gene-cluster specific k-mers, while keeping k-mer positional information. Useful for microbial GWAS analyses with higher interpretability.

588 9 0
andrewdalpino
dnahash

A specialized datastructure for counting short DNA sequences for use in Machine Learning and Bioinformatics.

332 2 0
raw-lab
mercat2

versatile k-mer counter and diversity estimator for database independent property analysis (DIPA) for multi-omic analysis

283 13 1
arriam-lab2
yack

fast and lightweight counting of short k-mers

54 1 0
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