Search Packages

torchxrayvision

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

biomcp-python

BioMCP: Biomedical Model Context Protocol

medmnist

[pip install medmnist] 18x Standardized Datasets for 2D and 3D Biomedical Image Classification

medpy

Medical image processing in Python

ngff-zarr

A lean and kind Open Microscopy Environment (OME) Next Generation File Format (NGFF) Zarr implementation.

edsnlp

Modular, fast NLP framework, compatible with Pytorch and spaCy, offering tailored support for French clinical notes.

pydicom-seg

Python package for DICOM-SEG medical segmentation file reading and writing

med-imagetools

Transparent and reproducible medical image processing pipelines in Python.

deid

best effort anonymization for medical images using python

asset-aware-mcp

Asset-Aware MCP Server — AI Agent precisely accesses tables, figures, sections from PDFs + .docx round-trip editing (DFM) with 46 tools / 13 resources, segmentation export, layout overlay, OCR preprocessing, knowledge graph (LightRAG)

biomcp-cli

BioMCP: Biomedical Model Context Protocol

mikan-rs

A medical image kit for segmentation metrics evaluation, native Rust support, and Python bindings for cross-language performance.

fuse-med-ml

A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)

paperai

📄 🤖 AI for medical and scientific papers

medical-mcps

MCP servers for biological and medical APIs

fhir-kindling

Python library to simplify working with FHIR servers and resources.

delia

DICOM Extraction for Large-scale Image Analysis (DELIA).

rdm

Our regulatory documentation manager. Streamlines 62304, 14971, and 510(k) documentation for software projects.

labelfusion

Implementation of various label fusion approaches for medical imaging.

python-daily-med

Python Library for interaction with US NLM Daily Med API

paperetl

📄 ⚙️ ETL processes for medical and scientific papers

crashs

CRASHS: Cortical Reconstruction for Automatic Segmentation of Hippocampal Subfields (ASHS)

faker-healthcare-provider

Generate realistic healthcare test data in 6 languages (en, es, pt, zh, fr, de): 150+ diseases with correlated ICD-10 codes, medications, symptoms, and more

zensols-mednlp

Medical natural language parsing and utility library