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teemi

A Python package for constructing microbial strains

cnapy

An integrated visual environment for metabolic modeling methods such as FBA, FVA and Elementary Flux Modes, and advanced features such as thermodynamic methods, extended Minimal Cut Sets, OptKnock, RobustKnock, OptCouple and more!

retropath2-wrapper

'python wrapper to run retropath2.0 knime workflow'

optlang-enumerator

Module for enumerating minimal cut sets

optithor

Linear-programming–based optimization of microbial growth media under elemental stoichiometric constraints.