Search Packages

xicra

Small RNAseq pipeline for paired-end reads

mirtop

command lines tool to annotate miRNAs with a standard mirna/isomir naming

mirmachine

MirMachine, a command line tool to detect microRNA homologs in genome sequences.

seqcluster

small RNA analysis from NGS data

bio2bel-mirbase

A Bio2BEL package for miRBase (http://www.mirbase.org)

smallrnaseq

Package for short RNA-seq analysis

mirnablast

Use mature query miRNA sequences to BLAST the genome, fold the flanking sequences of the subjects to find possible homologous miRNA locus