Search Packages

dna-features-viewer

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

cryosparc-tools

Python library that enables scripting access to CryoSPARC, a cryo-EM software package.

glycowork

Package for processing and analyzing glycans and their role in biology.

multimolecule

Accelerate Molecular Biology Research with Machine Learning

dnacauldron

Cloning simulation for DNA assembly (Golden Gate, Gibson...)

pypath-omnipath

Python module for prior knowledge integration. Builds databases of signaling pathways, enzyme-substrate interactions, complexes, annotations and intercellular communication roles.

primer3plus

A easy-to-use Python API for Primer3 primer design.

dasi

A Python molecular biology CAD tool with a dead-simple user interface

streq

🧬 Python utilities for working with nucleotide sequence strings.

dnadesign

A lua package for designing DNA.

bandwagon

🎺 Plot DNA digestion band patterns with Python

dna-features-viewer-lite

:eye: Python library to plot DNA sequence features (e.g. from Genbank files)

caravagene

🎨 Python library to plot multi-part genetic constructs

crazydoc

Read DNA sequences from colourful Microsoft Word documents

bioexplorer

The Blue Brain BioExplorer (BBBE) is a tool for data visualization experts and scientists to extract and analyze scientific data from visualization and interactive exploration

monte-barcode

Generating sets of random DNA sequences optimized for use in high-throughput sequencing.

primerlab-genomic

A modular genomic toolkit focused on automated primer design, sequence validation, and workflow orchestration. Built for reliability, reproducibility, and scalable bioinformatics workflows.

ogilo-array

Automated construction of oligo library sequences for oligo array synthesis.

pylabrat

A basic science lab framework aimed at reproducibility and lab management.

mediamaker

Media Maker Python SDK for Blue Brain BioExplorer

cisvar

Calculate both pre and post frequencies for ChIP or ATAC style data