PyPI Stats
  • Insights
  • PyPI
  • GitHub
  • Search
  • Compare
  • Advisories
  • Ecosystem
  • About
Home

Search Packages

Find Python packages by name, description, GitHub topic, or filter by metrics
LabShengLi
nanome-jax

NANOME (Nanopore methylation) pipeline developed by Li Lab at The Jackson Laboratory

1K 34 10
lrslab
nanocem

"nanoCEM" is a simple tool designed to visualize the features that distinguish between two groups of ONT data at the site level.

718 18 2
WGLab
nanorepeat

NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data

601 19 4
rnajena
dynamont

Segmentation/resquiggling tool for ONT signals.

480 5 1
jkmckenna
smftools

Single Molecule Footprinting Analysis in Python

478 2 0
Woodformation1136
nanoprep-ffm

A fully-equipped, fast, memory-efficient pre-processor for ONT transcriptomic data

431 2 0
GoekeLab
xpore

Identification of differential RNA modifications from nanopore direct RNA sequencing

394 165 24
bioinfomaticsCSU
deepsignal

Detecting methylation using signal-level features from Nanopore sequencing reads

299 118 23
dietvin
pod5viewer

GUI for inspecting POD5 files

237 34 1
PengNi
deepsignal-plant

Detecting methylation using signal-level features from Nanopore sequencing reads of plants

207 66 11
joshuaowalker
specimux

Dual barcode and primer demultiplexing system for MinION sequenced reads

175 6 0
Woodformation1136
nanoprepro

A fully-equipped, fast, memory-efficient pre-processor for ONT transcriptomic data

75 2 0
nanoporetech
wahoo

Training models for basecalling Oxford Nanopore reads

63 115 43
tjiangHIT
rmetl

realignment-based Mobile Element insertion detection Tool for Long read

35 21 4
    • Data from PyPI, GitHub, ClickHouse, and BigQuery