Python3 scripts to manipulate FASTA and FASTQ files
Project Manager for NGS data analysis
ARIBA: Antibiotic Resistance Identification By Assembly
AMPtk: amplicon tool kit
Forensic analysis tool useful in backwards computing information from next-generation sequencing data.
NGSphy: phylogenomic simulation of next-generation sequencing data
Create WDL documentation using Markdown.
A tool to circularize genome assemblies
SigAlign's language binding for python
Iterative Virus Assembler
Python package for microsatellite genotyping from amplicon sequencing data
Comparative TraDIS analysis
Yet Another SIMulator for Alternative Splicing Events and Realistic Gene Expression Profile
Loop-calling and peak-calling for sequencing-based interaction data, including related analysis utilities.
Divide NGS data by barcode and primer
A Framework to call Structural Variants from NGS based datasets
SEROBA: Serotyping for illumina reads
