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pytest-workflow

Configure workflow/pipeline tests using yaml files.

nf-core

Python package with helper tools for the nf-core community.

nextflowpy

Python wrapper around Nextflow.

micone

The Microbial Co-occurrence Network Explorer

quantms-utils

A python library with scripts and helpers classes for quantms workflow

monsda

MONSDA, Modular Organizer of Nextflow and Snakemake driven hts Data Analysis

nflaunch

nflaunch is a command-line tool to simplify launching Nextflow pipelines on cloud batch services (GCP Batch)

flowcraft

A Nextflow pipeline assembler for genomics. Pick your modules. Assemble them. Run the pipeline.

pybrave

Bioinformatics Reactive Analysis and Visualization Engine

covviz

Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata

sceptr-profiling

Statistical Characterisation of Expression Profiles in Transcriptomes

assemblerflow

FlowCraft: a component-based pipeline composer for omics analysis using Nextflow. :whale::package:

py-nf

Python library to execute batches of jobs using nextflow.

nf-python-plugin

Nextflow plugin enabling seamless integration between Nextflow and Python 🧪