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open2c
bioframe

Genomic interval operations on Pandas DataFrames

32K 191 35
ArcInstitute
screenpro2

Flexible analysis of high-content CRISPR screening

2K 32 7
EMBL-Hentze-group
htseq-clip

htseq-clip: a toolset for the analysis of eCLIP/iCLIP datasets

2K 3 1
ncbi
pm4ngs

Project Manager for NGS data analysis

2K 31 10
RIVM-bioinformatics
ampligone

A tool in order to accurately remove primer sequences from NGS reads in an amplicon experiment

952 20 1
RIVM-bioinformatics
aminoextract

AminoExtract is a tool for translating and extracting amino acid sequences from nucleotide-sequences based on a GFF input

925 1 0
afrendeiro
ngs-toolkit

A toolkit for NGS analysis with Python

802 14 4
ishinder
eastr

Tool for emending alignments of spuriously spliced transcript reads

527 12 1
gabrielvpina
viralquest

A user-friendly pipeline for viral diversity analysis and characterization.

301 13 1
babinyurii
apobec

scripts for mutations counting in deep sequencing data

179 2 1
babinyurii
crispr-cas9

NGS data analysis scripts for HBV elimination research group

129 4 3
kkokay07
laax

Repository for population genetics and quantitative genetics metrics implementarion and visualization

68 2 0
cchrysostomou
seqtables

Tools for analyzing NGS sequence data and aligned protein sequences

52 5 2