PyPI Stats

Omop Python Packages

Python packages with the GitHub topic omop. Sorted by relevance, with stars and monthly downloads.
omopHub
omophub

Python SDK for OMOP/OHDSI vocabularies - query 10M+ medical concepts across SNOMED, ICD-10, RxNorm, LOINC & 90+ terminologies via simple API

4K 4 2
RADar-AZDelta
rabbit-in-a-blender

An ETL pipeline to transform your EMP data to OMOP.

4K 16 6
aphp
eds-scikit

eds-scikit is a Python library providing tools to process and analyse OMOP data

360 45 6
DZD-eV-Diabetes-Research
dzdomop

A Python data class representation of the Observational Medical Outcomes Partnership (OMOP) Common Data Model (CDM)

353 3 1
thehyve
kotobuki

Update Usagi mappings with kotobuki

264 3 0
edencehealth
sqlalchemy-omopcdm

OMOP CDM v5.4 SQLAlchemy Declarative Mapping Models

164 1 0
callahantiff
omop2obo

OMOP2OBO is the first health system-wide, disease-agnostic mappings between standardized clinical terminologies in the Observational Medical Outcomes Partnership (OMOP) common data model and several Open Biomedical Ontologies (OBO).

79 96 12