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sequana
sequana

Sequana: a set of Snakemake NGS pipelines

6K 151 27
ablab
isoquant

Transcript discovery and quantification with long RNA reads (Nanopores and PacBio)

2K 222 22
fritzsedlazeck
sniffles

Structural variation caller using third generation sequencing

2K 651 101
mortazavilab
swan-vis

A Python library to visualize and analyze long-read transcriptomes

506 69 12
GDelevoye
ipdtools

Retro-ingineering of PacBio's modelling of IPD (RSII, Sequel I, Sequel II v2)

284 2 0
andrewjpage
tiptoft

Predict plasmids from uncorrected long read data

207 41 10
mbhall88
pistis

Quality control plotting for long reads

204 10 1
simpsonlab
preqc-lr

Quality control tool for long read sequencing data

80 3 2
andrewjpage
plasmidpredictor

plasmidpredictor: predict which plasmid should be present from uncorrected long read data

79 41 10
simpsonlab
preqclr

preqclr is a software tool that reports on quality for long read sequencing data without the use of a reference genome.

55 3 2
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