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emilydolson
phylotrackpy

Python phylogeny tracker for in silico evolution experiments

14K 11 2
theosanderson
taxoniumtools

Generate files for taxonium

4K 131 28
agormp
phylotreelib

Library for analyzing and manipulating phylogenetic trees

4K 15 2
agormp
sumt

Computes consensus trees and other phylogenetic tree summaries

2K 3 0
prophyle
prophyle

Accurate, resource-frugal and deterministic DNA sequence classifier.

2K 36 5
bioconvert
bioconvert

Bioconvert is a collaborative project to facilitate the interconversion of life science data from one format to another.

834 391 45
biocore
empress

Fast and scalable phylogenetic tree viewer for multi-omic data analysis

283 55 32
alexander-pv
pyiwe

Python wrapper for TNT (Tree analysis using New Technology) implied weighting with clades support

236 2 0
agormp
treedist

Computes measures of (dis)similarity between phylogenetic trees. Provides summaries of shared and unique bipartitions.

123 1 0
kullrich
oggmap

extract orthologous maps (short: orthomap) from OrthoFinder output for query species

57 4 0
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