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dohlee
abyssal-pytorch

Abyssal - Pytorch

565 6 2
biocentral
biocentral-api

Programmatic access to the biocentral ecosystem.

498 2 0
Dipayan26
protembedder

Extract protein embeddings from FASTA files using ESM-2, ProtT5, and ProtBert models

413 0 0
yutanagano
sceptr

Fast and performant TCR representation model

406 15 3
dohlee
antiberty-pytorch

An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.

280 26 5
dohlee
proteinbert-pytorch-reproduction

Implementation of ProteinBERT, a deep language model designed for proteins.

259 3 0
isyslab-hust
protflash

ProtFlash: A lightweight protein language model

227 98 3
mims-harvard
spectrae

SPECTRA: The spectral framework for model evaluation

160 43 6
dohlee
deepab-pytorch

An unofficial re-implementation of DeepAb, an interpretable deep learning model for antibody structure prediction.

151 3 0
patrik-ackerman
antifp2

AntiFP2: A tool for prediction of Antifungal Proteins

141 0 0
LLNL
protlib-designer

Integer Linear Programming for Protein Library Design

112 9 2