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alphafold3-pytorch

Implementation of Alphafold 3 from Google Deepmind in Pytorch

prospr

Prospr is a universal toolbox for protein structure prediction within the HP-model. The Python package is based on a C++ core, which gives Prospr its high performance. The C++ core is made available as a separate zip file to facilitate high-performance computing applications. The package comes with many prediction algorithms and datasets to use.

protpy

Calculating a range of protein descriptors using their physicochemical, biological and structural properties 🔬.

biosaic

KMer level tokenizer for DNA & Proteins sequences

igfold-pytorch

IgFold - Pytorch

deepab-pytorch

An unofficial re-implementation of DeepAb, an interpretable deep learning model for antibody structure prediction.

dmpfold

Fast and accurate protein structure prediction