Search Packages

epiweeks

Epidemiological weeks calculation based on CDC (MMWR) and ISO week numbering systems

starsim

Starsim disease modeling framework

us-water-quality-data

US drinking water quality data by ZIP code — EPA violations, lead/copper levels, PFAS, radon, flood risk, and Home Safety Scores for 41,000+ ZIPs. 20 federal/state sources. Updated daily. CC BY 4.0.

covid-surge

COVID-19 mortality surge period calculation for communities afflicted by the corona virus SARS-CoV-2

episia

Python toolkit for epidemiological modelling and reporting. SIR/SEIR/SEIRD compartmental models, sensitivity analysis, interactive visualisations, and automated HTML/Markdown/JSON reports, built for low-resource health contexts.

dii-calculator

A Python package for calculating the Dietary Inflammatory Index (DII) from nutrient intake data

lissero

In silico serotyping of Listeria monocytogenes

pydhis2

🏥 A Modern and Resilient DHIS2 Client with Built-in WHO-DQR Validation for LMICs

medicaid-utils

Python toolkit for Medicaid claims data analysis — preprocessing, cleaning, risk adjustment, quality measures, and patient-level file construction for MAX and TAF CMS data

kudos

Combinatorial optimization for developing public health case definitions