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genomoncology
biomcp-python

BioMCP: Biomedical Model Context Protocol

39K 500 101
titipata
pubmed-parser

:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

9K 729 177
genomoncology
biomcp-cli

BioMCP: Biomedical Model Context Protocol

4K 500 101
krassowski
easy-entrez

Retrieve PubMed articles, text-mining annotations, or molecular data from >35 Entrez databases via easy to use Python package - built on top of Entrez E-utilities API.

746 81 6
Rostlab
nalaf

NLP framework in python for entity recognition and relationship extraction

399 115 24
jakelever
pubrunner

A framework for keeping biomedical text mining result up-to-date

384 42 6
danielfrees
scrapemed

Data Scraping for PubMed Central.

239 17 1
genomoncology
iflow-mcp-biomcp-python

BioMCP: Biomedical Model Context Protocol

158 500 101
kermitt2
biblio-glutton-harvester

Open Access PDF harvester

128 42 5
genomoncology
iflow-mcp-genomoncology-biomcp

Biomedical Model Context Protocol Server

110 500 101
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