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mdshw5
pyfaidx

Efficient pythonic random access to fasta subsequences

928K 485 76
robaina
filtersam

('Tools to filter sam o bam files by percent identity or percent of matched sequence',)

423 6 0
erinyoung
amplicon-coverage-inspector

Visualization of coverage for amplicon sequencing

342 3 0
etkayapar
bamrefine

Small program to mask positions that are likely to result in PMD artifact from a BAM file using a predefined SNP catalog

260 4 1
tiagofilipe12
plasmiduncover

Script to obtain plasmid id from WGS data using bowtie2 to map

67 1 1
dasprosad
yafax

Yet Another FASTA Index and Extraction Tool

65 0 0
innovate-invent
bampy

Python implementation of htslib supporting BAM, SAM, and BGZF compression

48 1 0
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