Sequence Python Packages

pygrinder

PyGrinder: a Python toolkit for grinding data beans into the incomplete for real-world data simulation by introducing missing values with different missingness patterns, including MCAR (complete at random), MAR (at random), MNAR (not at random), sub sequence missing, and block missing

122K 65 6

pyfastx

a python package for fast random access to sequences from plain and gzipped FASTA/Q files

88K 294 24

mdiff

Package for finding difference between two input sequences with ability to detect sequence elements displacements.

11K 32 0

sequenzo

A fast, scalable, and intuitive Python package in sequence analysis.

10K 34 10

django-generate-series

Use Postgres' generate_series to create sequences with Django's ORM

5K 33 3

orange3-timeseries

🍊 :chart_with_upwards_trend: Orange add-on for analyzing, visualizing, manipulating, and forecasting time series data.

4K 66 41

pypynum

PyPyNum is a versatile Python math lib. It features modules for math, data analysis, arrays, crypto, physics, RNG, data proc, stats, eq solving, image proc, interp, matrix calc, and high-prec math. Designed for scientific computing, data science, and ML, it offers efficient, general-purpose tools.

3K 32 1