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pyiron
pysqa

Simple HPC queuing system adapter for Python on based jinja templates to automate the submission script creation.

11K 34 8
HECBioSim
longbow

Longbow is a tool for automating simulations on a remote HPC machine. Longbow is designed to mimic the normal way an application is run locally but allows simulations to be sent to powerful machines.

2K 18 5
yodeng
runjob

runjob is a program for managing a group of related jobs running on a compute cluster

942 11 4
zenotech
mycluster

"Utilities to support interacting with multiple HPC clusters"

897 11 2
datasnakes
htseqcountcluster

A cli for running multiple qsub jobs with HTSeq's htseq-count on a cluster.

301 4 0
relleums
qstat

parse Grid Engine qstat job info list into a list of python dicts

267 11 3
SalomePlatform
libbatch

Generic batch management library

233 0 1
datasnakes
orthoevol

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

147 28 5
datasnakes
datasnakes

An easy to use and comprehensive python package which aids in the analysis and visualization of orthologous genes. 🐵

144 28 5
qtop
qtop

qtop (pronounced queue-top) is a tool written in order to monitor the state of Queueing Systems, along with related information relevant on HPC & grid clusters. At present it supports **PBS, SGE & OAR** families. There is a historic reference for the prior shell version of the tool, at former CERN source:

126 45 25
yodeng
qsubwt

Simple wrapper for qsub which provides the functionality of the '-sync' option

114 2 0
scisweeper
scisweeper

scisweeper - scientific parameter sweeper, with easy debugging capabilities and an interface for most scientific queuing systems.

112 1 1
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