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singularityhub
spython

streamlined singularity python client (spython) for singularity

2.5M 65 31
NVIDIA
hpccm

HPC Container Maker

17K 512 101
ywatanabe1989
scitex-container

Unified container management for Apptainer and Docker — part of the SciTeX ecosystem

7K 0 0
pharmai
plip

Protein-Ligand Interaction Profiler - Analyze and visualize non-covalent protein-ligand interactions in PDB files according to 📝 Schake, Bolz, et al. (2025), https://doi.org/10.1093/nar/gkaf361

4K 676 141
FWDhr
composite-resolve

Evaluate Python functions at points where they're undefined.

4K 6 0
expfactory
expfactory

software to generate a reproducible container battery of experiments.

3K 39 15
singularityhub
singularity-hpc

Local filesystem registry for containers (intended for HPC) using Lmod or Environment Modules. Works for users and admins.

2K 130 29
clowdr
clowdr

Command-line utility for iteratively developing pipelines, deploying them at scale, and sharing data and derivatives

1K 10 3
bsc-wdc
pycompss

COMP Superscalar (COMPSs) is a framework which aims to ease the development and execution of applications for distributed infrastructures, such as Clusters, Grids and Clouds.

1K 64 24
getpopper
popper

Container-native task automation engine.

601 308 62
MariusCausemann
brainseg-containers

wrapper for brain segmentation tools

590 0 0
singularityhub
singularity-compose

orchestration for singularity containers (under development)

543 77 18
ethanluoyc
lxm3

LXM3: XManager launch backend for HPC clusters

387 10 1
pc2
jh-hpc-interface

JupyterHub + High-Performace Computing

310 6 1
connectomicslab
connectomemapper

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.

280 83 31
vuillaut
sshlab

Jupyter notebook / lab through ssh with a single command and config file

207 1 0
jtriley
gpucrate

Creates hard-linked GPU driver (currently just NVIDIA) volumes for use with docker, singularity, etc.

72 3 0
containers-ftw
cftw

containers for the win is a module for container competitions

61 1 2
andersy005
repo2singularity

Repo2apptainer: Wrapper around repo2docker producing Jupyter enabled Apptainer/Singularity images.

51 5 0
singularityhub
singularity-tunel

command line tool for general HPC functions using Singularity containers

37 2 0
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