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althonos
pyopal

Cython bindings and Python interface to Opal, a SIMD-accelerated database search aligner.

18K 10 1
scastlara
minineedle

Needleman-Wunsch and Smith-Waterman algorithms in python

2K 50 9
lignum-vitae
goombay

Python implementation of several local, global, and multiple sequence alignment algorithms intended to calculate distance, show alignment, and display the underlying matrices.

669 21 3
aziele
pairwise-sequence-alignment

Global and local pairwise alignments between nucleotide/protein sequences.

251 16 3
eniktab
gasal2-py

GASAL2-Py — Python bindings for GASAL2 (CUDA GPU sequence alignment). Search: GASAL2 python, GASAL2-Py.

33 0 0