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prism-oncology
novae

Graph-based foundation model for spatial transcriptomics data. Zero-shot spatial domain inference, batch-effect correction, and many other features.

2K 129 12
jianhuupenn
spagcn

SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network

2K 260 67
cafferychen777
chatspatial

MCP server for spatial transcriptomics analysis through natural language interfaces.

2K 34 8
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