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lucidrains
alphagenome-pytorch

Implementation of AlphaGenome, Deepmind's updated genomic attention model

5K 99 20
dputhier
pygtftk

A python package and a set of shell commands to handle GTF files

2K 52 6
Kuanhao-Chao
splam

✂️ Deep learning-based splice site predictor that improves spliced alignments

1K 61 5
gagneurlab
mmsplice

Tissue-specific variant effect predictions on splicing

952 43 24
dohlee
spliceai-pytorch

SpliceAI - Pytorch

353 15 3
slipnitskaya
regulas

Bioinformatics Tool for the Integrative Analysis of Alternative Splicing Regulome using RNA-Seq data

119 1 0
vrmelo
splice-q

SPLICE-q is a fast and user-friendly Python tool for genome-wide SPLICing Efficiency quantification

108 12 3
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