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stochastic

Generate realizations of stochastic processes in python.

biosimulators-gillespy2

GillesPy2 biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

stochpy

StochPy is a versatile stochastic modeling package which is designed for stochastic simulation of molecular control networks

bioscrape

BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)

biosimulators-bionetgen

BioNetGen biochemical network simulation program via BioSimulators-compliant command-line interface and Docker container

abstochkin

Agent-based Stochastic Kinetics: A method for simulating the dynamics of heterogeneous populations.

mumot

Multiscale Modelling Tool - mathematical modelling without the maths

pyrbm

A Python framework to build and simulate stochastic rules-based models

dynsis

Python wrapper for dynSIS Fortran simulations