Search Packages

pygenomeviz

A genome visualization python package for comparative genomics

jcvi

Python utility libraries on genome assembly, annotation and comparative genomics

akrup

AKRUP: ancestral karyotype reconstruction universal pipeline

synphage

Python library for plotting synteny diagram for phage and bacterial sequences.

hoodini-colab

Google Colab notebook for running Hoodini gene neighborhood analysis with a nice GUI

daisyblast

Python pipeline for automated synteny block detection and visualization from multiple genomes.

pyscaf

No description available

phyca

Universal ortholog based Phylogenomic toolkit.

superrec2

Run and compare algorithms for phylogenetic reconciliation and super-reconciliation

pynteny

Query sequence database by HMMs arranged in predefined synteny structure