Search Packages

mavis

Merging, Annotation, Validation, and Illustration of Structural variants

wormneuroatlas

Neural signal propagation atlas (Randi et al.), genome (WormBase), single-cell transcriptome (Taylor et al.), neuropeptide/GPCR deorphanization (Beets et al.), monoaminergic connectome (Bentley et al.), and chemical-synapse sign predictions (Fenyves et al.) all in one place. Read the docs: https://francescorandi.github.io/wormneuroatlas/

garnet

No description available

disc

A highly scalable and accurate inference of gene expression and structure for single-cell transcriptomes using semi-supervised deep learning.

eastr

Tool for emending alignments of spuriously spliced transcript reads

swan-vis

A Python library to visualize and analyze long-read transcriptomes

isocon

Pipeline for obtaining non-redundant haplotype specific transcript isoforms using PacBio IsoSeq reads.

isonclust

De novo clustering of long-read transcriptome reads.

orthomap

extract orthomap from OrthoFinder output for query species