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tskit-dev
msprime

Simulate ARGs and genomic sequence data using population genetic models

84K 214 92
fabiocaccamo
django-treenode

:deciduous_tree: probably the best abstract model/admin for your tree based stuff.

78K 798 38
llnl
llnl-hatchet

Graph-indexed Pandas DataFrames for analyzing hierarchical performance data

52K 35 19
bondeje
dtlib

A small package of basic data structures and algorithms; currently focusing on BinaryTrees and structures that utilize BinaryTrees. This is very much in development, but please take a look at the README.md and tell me what you think

5K 1 0
hatchet
hatchet

Analyze graph/hierarchical performance data using pandas dataframes

4K 119 41
ytree-project
ytree

A Python package for analyzing tree data and especially merger trees.

647 17 10
js51
splitp

Python package that implements split- and rank-based tools for inferring phylogenies, such as flattenings and subflattenings.

377 1 1
LLNL
callflow

Visualization tool for analyzing call trees and graphs

345 35 4
blei-lab
treeffuser

Treeffuser is an easy-to-use package for probabilistic prediction and probabilistic regression on tabular data with tree-based diffusion models.

323 56 9
wmaier
treetools

Tools for processing treebank trees

314 20 2
mradultiw
pyropes

$ pip install pyropes | This is an implementation of Rope/Chord data structure.

252 14 3
matteosandrin
structoscope

Structoscope is a Python library for visualizing and inspecting any data structure.

140 1 0
robin025
pythorn

A Python module for all the data structures and algorithms.

77 4 3
ayaanhossain
weldor

A reactive AI designed to assist you with Wordle variants

69 2 0
kariminf
shajara

Manupilating trees

59 8 0
Shikha-code36
competitivepython

A collection of algorithms for competitive programming

47 17 4
stevenschmatz
treegen

Generate all non-isomorphic, rooted trees efficiently

42 0 0
stevenschmatz
prufer

Conversion tool for Prüfer sequences

40 5 2
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