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cokelaer
bioservices

Access to Biological Web Services from Python.

50K 335 70
pachterlab
gget

🧬 gget enables efficient querying of genomic reference databases

38K 1K 85
AuReMe
esmecata

From taxonomic affiliations to annotated consensus proteomes using UniProt database.

2K 8 0
multimeric
unipressed

Comprehensive Python client for the Uniprot REST API

1K 56 7
mpc-bioinformatics
protgraph

ProtGraph - A Graph-Generator for Proteins

860 13 8
noamteyssier
ggetrs

Biological querying and analysis

369 44 3
kpj
gene-map

Map gene ids using UniProt.

339 5 1
Ruibin-Liu
pyuniprotkb

A python package to retrieve bioinformatics given Uniprot IDs.

269 5 0
josefdc
uniprot-mcp

Model Context Protocol server that surfaces UniProtKB data as MCP resources, tools, and prompts.

244 2 2
tacular-omics
uniprotptmpy

Python library for parsing and querying the UniProt PTM controlled vocabulary list.

221 0 0
RECETOX
freqsap

Find frequency of single amino-acid polymoprhisms.

201 0 0
AiAgentKarl
bioinformatics-mcp-server

MCP server for bioinformatics data — genes, proteins, PubMed, ClinVar and sequences via NCBI & UniProt (free, no API key)

174 0 0
bio2bel
bio2bel-uniprot

UniProt Knowledge Base to BEL

153 0 1
widdowquinn
ncfp

ncfp is a script and module that facilitates recovery of nucleotide sequences from NCBI encoding a specified set of input protein sequences

130 3 2
irfan112
hcv-genotypes

hcv genotypes Dataset

109 0 0
HrishiDhondge
unipdb-mapper

Python Package for residue mapping between UniProt and PDB entries.

82 2 0
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