Search Packages

bioservices

Access to Biological Web Services from Python.

gget

🧬 gget enables efficient querying of genomic reference databases

esmecata

From taxonomic affiliations to annotated consensus proteomes using UniProt database.

unipressed

Comprehensive Python client for the Uniprot REST API

protgraph

ProtGraph - A Graph-Generator for Proteins

ggetrs

Biological querying and analysis

gene-map

Map gene ids using UniProt.

pyuniprotkb

A python package to retrieve bioinformatics given Uniprot IDs.

uniprot-mcp

Model Context Protocol server that surfaces UniProtKB data as MCP resources, tools, and prompts.

uniprotptmpy

Python library for parsing and querying the UniProt PTM controlled vocabulary list.

freqsap

Find frequency of single amino-acid polymoprhisms.

bioinformatics-mcp-server

MCP server for bioinformatics data — genes, proteins, PubMed, ClinVar and sequences via NCBI & UniProt (free, no API key)

bio2bel-uniprot

UniProt Knowledge Base to BEL

ncfp

ncfp is a script and module that facilitates recovery of nucleotide sequences from NCBI encoding a specified set of input protein sequences

hcv-genotypes

hcv genotypes Dataset

unipdb-mapper

Python Package for residue mapping between UniProt and PDB entries.