Search Packages

bioutils

provides common tools and lookup tables used primarily by the hgvs and uta packages

biocommons-seqrepo

non-redundant, compressed, journalled, file-based storage for biological sequences

hgvs

Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature.org/).

seqrepo

non-redundant, compressed, journalled, file-based storage for biological sequences

anyvar

Lightweight, portable variation registration and retrieval

msda

MSDA - An open source, low-code time-series multi-sensor data analysis, unsupervised feature selection, deep unsupervised anomaly detection & explainable time-series predictor library in Python.

biocommons-anyvar

Lightweight, portable variation registration and retrieval

seqrepo-rest-service

OpenAPI-based REST interface to biological sequences and sequence metadata