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Clinical Trials Python Packages

Python packages with the GitHub topic clinical-trials. Sorted by relevance, with stars and monthly downloads.
genomoncology
biomcp-python

BioMCP: Biomedical Model Context Protocol

39K 500 101
dermatologist
pyomop

Python package for managing OHDSI clinical data models. Includes support for LLM based plain text queries, MCP server and FHIR import.

12K 62 11
clinicedc
edc

A framework for multisite longitudinal clinical trials built on Django

12K 34 10
effect-trial
effect-edc

EFFECT Trial EDC (https://www.isrctn.com/ISRCTN30579828)

10K 1 1
ambition-trial
ambition-subject

(P.I. Joe Jarvis) Subject models and views for Ambition

7K 1 0
clinicedc
edc-appointment

Add scheduled study appointments and appointment management to your clinical trial app

6K 0 3
jvfe
pytrials

Python package that wraps around the ClinicalTrials.gov API

6K 60 20
clinicedc
edc-visit-tracking

Base classes for visit reports/tracking in clinicedc/edc

5K 1 4
clinicedc
edc-dashboard

Core classes for dashboards in clincedc/edc projects. e.g. Listboard, SubjectDashboard

4K 1 3
clinicedc
edc-export

Export Edc models to CSV

4K 0 2
clinicedc
edc-lab

Lab module to Receive, Process, Pack, Verify, Ship

4K 0 1
genomoncology
biomcp-cli

BioMCP: Biomedical Model Context Protocol

4K 500 101
clinicedc
edc-data-manager

Data manager administrative models and classes

4K 1 1
clinicedc
edc-adverse-event

Adverse Event classes

3K 0 1
alethiotx
alethiotx

Alethio Therapeutics Python Toolkit

3K 0 0
clinicedc
edc-locator

Base models, forms and admin for participant locator in clinicedc/edc projects

3K 0 3
clinicedc
edc-registration

Add a master patient record and registration services to your app

3K 1 1
clinicedc
edc-pdutils

Use pandas with clinicedc/edc projects

3K 0 1
clinicedc
edc-reportable

Reportable clinic events, reference ranges, grading

3K 0 1
ambition-trial
ambition-screening

Determine a subject's eligibility

2K 1 0
clinicedc
edc-facility

Customize appointment scheduling by clinic facility

2K 0 3
cthoyt
clinicaltrials-downloader

Download and process ClinicalTrials.gov

2K 1 0
ambition-trial
ambition-visit-schedule

Ambition Visit Schedule

2K 1 1
microqueryhq
microquery-mcp

MCP server for microquery.dev — SQL over FDA, SEC, PubMed, blockchain, and more

2K 0 0
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