Ecology Python Packages

niamoto

Biodiversity publishing tool for ecological data, from import to static portal generation.

16K 4 0

pygbif

GBIF Python client

13K 146 39

audio-workbench

Interactive waveform + spectrogram audio player for analysis, annotation, and embeddable previews (Web, Streamlit, Gradio)

7K 1 0

pingmapper

Open-source interface for processing recreation-grade side scan sonar datasets and reproducibly mapping benthic habitat

7K 79 12

megadetector

MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.

6K 274 47

wildlife-datasets

WildlifeDatasets: An open-source toolkit for animal re-identification

5K 170 21

megadetector-utils

MegaDetector is an AI model that helps conservation folks spend less time doing boring things with camera trap images.

2K 274 47

pyphenology

Plant phenology models in python with a scikit-learn inspired API

2K 34 11

stemflow

A Python Package for Adaptive Spatio-Temporal Exploratory Model (AdaSTEM)

2K 26 1

aoh

Area of Habitat calculation code for biodiversity assessment pipelines

1K 4 3

phenopype

A phenotyping pipeline for Python

1K 13 4

pyforestscan

A python package for calculating forest structural metrics from airborne point clouds.

1K 81 8

biolith

Bayesian Ecological Modeling in Python

815 37 2

nlmrs

A Rust crate for building Neutral Landscape Models.

616 4 0

audio-workbench-player

Interactive waveform + spectrogram audio player for analysis, annotation, and embeddable previews (Web, Streamlit, Gradio)

529 1 0

gridfia

GridFIA - Python API for spatial forest biomass analysis | Part of fiatools.org

356 2 2

hawkears

Scan audio recordings and identify birds, amphibians and other classes.

305 4 0

cpforager

Python code to handle data gathered from biologgers (GPS, TDR, AXY) attached to central-place foraging seabirds. The idea is to make movement ecology data a bit easier to process.

301 5 3

eco-code-analyzer

Eco-Code Analyzer is a Python library that analyzes code for its ecological impact and provides a score based on various factors such as energy efficiency, resource usage, and code optimizations.

281 2 3