Fair Python Packages

sssom-pydantic

An opinionated implementation of a simple subset of SSSOM, based on Pydantic

biomero

BIOMERO.analyzer - A python library for easy connecting between OMERO (jobs) and a Slurm cluster

signposting

Python library for parsing FAIR Signposting links

howfairis

Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations

omnipy

Omnipy is a high level Python library for type-driven data wrangling and scalable workflow orchestration (under development)

text2term

a tool for mapping free-text descriptions of entities to ontology terms

somesy

A CLI tool for synchronizing software project metadata

fair-cli

Synchronization interface for the SCRC FAIR Data Pipeline registry

snapquery

Just Query wikidata and other SPARQL endpoints by query name - a frontend to Introduce Named Queries and Named Query Middleware to wikidata and other SPARQL endpoints

deep-code

deep-code is a lightweight python tool that aid integration of DeepESDL datasets, experiments with EarthCODE.

epyr-tools

Professional Python toolkit for EPR spectroscopy data analysis. Load Bruker files, apply baseline correction, analyze lineshapes, and convert to FAIR formats. Complete CLI suite with comprehensive testing.

bhklab-project-template

Setup FAIR and DMP compliant projects with one command

scipion-em-modelangelo

Scipion plugin for ModelAngelo: an automatic atomic model building program for cryo-EM maps. With or without providing a sequence.

modos

Python API to manage multi-omics digital objects

fairspec-extension

Fairspec Extension is a repository template for rapid Fairspec extension development

fairspec-dataset

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

django-signposting

Add FAIR signpostings to response headers in Django

nmrformd

Calculate dipolar NMR relaxation time from molecular dynamics trajectory file

om-api-client

Hydrological Status and Outlook System community

fairspec-metadata

Fairspec TypeScript is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

metador-core

Core of Metador, the metadata-first research data management framework.

fairspec-cardealer

Fairspec Cardealer is a data exchange format for car dealerships. It is developed on top of the Fairspec standard

fairspec

Fairspec Python is a fast data management framework built on top of the Fairspec standard and Polars DataFrames

fairspec-table

Fairspec Python is a fast data management framework built on top of the Fairspec standard and Polars DataFrames