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Medical Image Processing Python Packages

Python packages with the GitHub topic medical-image-processing. Sorted by relevance, with stars and monthly downloads.
Project-MONAI
monai

AI Toolkit for Healthcare Imaging

444K 8K 1K
mlmed
torchxrayvision

TorchXRayVision: A library of chest X-ray datasets and models. Classifiers, segmentation, and autoencoders.

95K 1K 248
TorchIO-project
torchio

Medical imaging processing for AI applications.

90K 2K 262
DigitalSlideArchive
histomicstk

A Python toolkit for pathology image analysis algorithms.

59K 470 128
qurit
rt-utils

A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs.

22K 255 73
Project-MONAI
monai-weekly

AI Toolkit for Healthcare Imaging

19K 8K 1K
InsightSoftwareConsortium
itk-tubetk

TubeTK is an open-source toolkit for the segmentation, registration, and analysis of tubes and surfaces in images, developed by Kitware, Inc.

8K 55 59
brianmanderson
dicomrttool

Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

8K 108 30
JoHof
lungmask

Automated lung segmentation in CT

4K 779 164
frankkramer-lab
miscnn

A framework for Medical Image Segmentation with Convolutional Neural Networks and Deep Learning

3K 421 118
ProjectNeura
mipcandy

Build a complete experiment pipeline for your PyTorch MIP model in 10 seconds.

2K 291 44
WeiXuanChan
medimgproc

Medical Image Processing module for viewing and editing.

2K 2 0
kyle0x54
medvision

A python library for medical image computer vision.

1K 5 1
ykuo2
dicom2jpg

A simple Python function tool to convert DICOM files into jpg/png/bmp/tiff files and numpy.ndarray

1K 40 13
EdAlita
chameleoniq

ChameleonIQ: Nema-aware Image Quality Tool for Python

1K 1 0
CBICA
dlicv

A repository that allows users to apply the DLICV method to their brain imaging data.

844 2 0
MEDomicsLab
mediml

Python Open-source package for medical images processing and radiomics features extraction.

673 8 2
mralinp
tdsc-abus2023-pytorch

Grand Challenge TDSC ABUS 2023 dataset for pytorch

645 3 0
brianmanderson
plotscrollnumpyarrays

Tools to help with the conversion of DICOM images, RT Structures, and dose to useful Python objects. Essentially DICOM to NumPy and SimpleITK Images

633 108 30
MEDomics-UdeS
medimage-pkg

Python Open-source package for medical images processing and radiomics features extraction.

626 8 2
maxrousseau
pfla

pfla: Python Facial Landmark Analysis

573 6 3
pwoznicki
autorad

The easiest tool for experimenting with radiomics features.

541 43 11
ImagingDataCommons
pyplastimatch

Python wrapper for Plastimatch.

515 20 6
medlee-code
radvis

RadVis (Radiology Visualization) is a visualization tool for medical images.

513 4 0
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