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Medicine Python Packages

Python packages with the GitHub topic medicine. Sorted by relevance, with stars and monthly downloads.
mims-harvard
pytdc

Therapeutics Commons (TDC): Multimodal Foundation for Therapeutic Science

108K 1K 211
Medial-EarlySign
medpython

Medial EarlySign Python

4K 4 0
dermatologist
dhti-elixir-base

Base classes for dhti-elixir

1K 3 0
shz9
viprs

Variational Inference of Polygenic Risk Scores (VIPRS)

1K 30 3
lucidrains
med-seg-diff-pytorch

MedSegDiff - SOTA medical image segmentation - Pytorch

1K 238 28
teffalump
orthanc-rest-client

REST client for Orthanc DICOM servers

887 19 3
fschwar4
pycohortflow

Lightweight cohort flow diagrams built on Matplotlib.

685 0 0
AberystwythSystemsBiology
medialpy

MEDIcal Abbreviations Lookup in Python

682 12 2
teffalump
beren

REST client for Orthanc DICOM servers

454 19 3
zms-publishing
zms

ZMS6: Simplified Content Modelling

433 15 6
cogstack
opengpt

A framework for creating grounded instruction based datasets and training conversational domain expert Large Language Models (LLMs).

393 362 45
Ceyeborg
gs1grader

GS1Grader - Grading datamatrices based on GS1 guidelines

343 3 0
lightbluetitan
meddatasets

The meddatasets library contains clinical research datasets, cancer diagnostic records, chronic disease statistics, smoking and cancer risk data, worldwide COVID-19 case records, water pollution and disease impact data, and much more.

337 2 0
Medial-EarlySign
medpython-etl

Medial EarlySign ETL Library

249 2 0
vanderschaarlab
temporai

TemporAI: ML-centric Toolkit for Medical Time Series

230 128 24
cherenkov-plenoscope
ray-voxel-overlap

Estimating system-matrices for tomography

144 6 0
insilicomedicine
p3gpt

Precious3 GPT - A multimodal language model for biomedical applications

127 19 4
SML-CompBio
oncomark

A deep learning tool designed to predict Cancer Hallmark activities from tumor biopsy samples.

120 3 0
XanderJC
medkit-learn

The Medkit-Learn(ing) Environment: Medical Decision Modelling through Simulation (NeurIPS 2021) by Alex J. Chan, Ioana Bica, Alihan Huyuk, Daniel Jarrett, and Mihaela van der Schaar.

109 29 1
banderlog
drg2txt

Map MS-DRG v38.1 DRG/MDC numeric codes to their text description

94 1 0
zms-publishing
zms3

Running on Python 2.7 (stable, production ready)

65 3 1
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