Mri Python Packages | PyPI Stats

sigpy

Python package for signal processing, with emphasis on iterative methods

15K 337 104

dcm2niix

dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

12K 1K 257

torchkbnufft

A high-level, easy-to-deploy non-uniform Fast Fourier Transform in PyTorch.

10K 250 48

smriprep

Structural MRI PREProcessing (sMRIPrep) workflows for NIPreps (NeuroImaging PREProcessing tools)

10K 163 46

deepinv

DeepInverse: a PyTorch library for solving imaging inverse problems using deep learning

7K 724 168

pypulseq

Pulseq in Python

7K 198 88

mrzerocore

Python package and documentation for MR-zero

6K 70 24

totalspineseg

Robust Segmentation and Labeling of Vertebrae, Intervertebral Discs, Spinal Cord, and Spinal Canal in MRI Images Using nnU-Net and Iterative Algorithm.

6K 95 8

fastmri

A large-scale dataset of both raw MRI measurements and clinical MRI images.

6K 2K 420

mriqc

Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain

5K 358 138

scitex-dataset

Multi-domain scientific dataset fetcher — neuroscience, biology, pharmacology, medical. Part of SciTeX.

4K 0 0

auxiliary

helpful functions for handling biomedical-imaging data in DICOM or NIfTI format

3K 2 3

phantominator

Generate numerical phantoms.

3K 44 2

ssfp

SSFP simulation and algorithms.

3K 12 1

zarrnii

Package for working with OME-Zarr and NIFTI images in a unified manner, with a focus on spatial transformations

3K 10 4

moneyfeel-mri

Free REST API for the moneyfeel Macro & Geopolitical Risk Index (MRI) — market regime classifier covering 5 regions across Daily/Weekly/Monthly timeframes. Free for researchers, quants and portfolio managers.

2K 1 0