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Napari Python Packages

Python packages with the GitHub topic napari. Sorted by relevance, with stars and monthly downloads.
napari
npe2

napari plugin engine v2

143K 19 36
napari
napari

napari: a fast, interactive, multi-dimensional image viewer for python

139K 3K 489
napari
napari-plugin-manager

napari plugin manager to provide a graphical user interface for installing napari plugins.

58K 9 11
4DNucleome
partseg

Tool for segmentation in bioimaging

18K 37 10
scverse
napari-spatialdata

Interactive visualization of spatial omics data

18K 85 23
Kapoorlabs-CAPED
napatrackmater

Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.

10K 18 3
matplotlib
napari-matplotlib

Linking napari layers with Matplotlib plots

9K 43 23
tlambert03
napari-omero

Browse your OMERO database from within napari.

6K 40 16
haesleinhuepf
napari-skimage-regionprops

Feature extraction for labeled objects in images using regionprops from scikit-image

6K 55 13
hanjinliu
impy-array

Speed up coding/extending image analysis in Python.

3K 37 1
napari
napari-animation

A napari plugin for making animations

2K 96 33
brainglobe
brainreg-segment

Segmentation of anatomical structures in a common coordinate space

2K 36 12
clEsperanto
napari-pyclesperanto-assistant

GPU-accelerated image processing in napari using OpenCL

2K 36 9
AllenCellModeling
napari-aicsimageio

Multiple file format reading directly into napari using pure Python

2K 38 12
brainglobe
brainglobe-segmentation

Segmentation of anatomical structures in a common coordinate space

2K 36 12
jhnnsrs
mikro-napari

napari within the mikro environment

1K 0 0
brisvag
blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

1K 30 10
brainglobe
cellfinder-napari

Efficient cell detection in large images using cellfinder in napari

1K 22 4
pkosurilab
bellavista

Python package for interactive visualization of imaging-based spatial transcriptomics

1K 7 2
AllenCell
napari-allencell-segmenter

A plugin that enables 3D image segmentation provided by Allen Institute for Cell Science

1K 19 8
BioimageAnalysisCoreWEHI
lls-core

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

1K 14 6
stardist
stardist-napari

Object Detection with Star-convex Shapes

797 39 10
Mouseland
cellpose-napari

napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool

763 63 26
InsightSoftwareConsortium
itk-napari-conversion

Convert between itk and napari data structures.

652 4 1
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