PyPI Stats

Napari Python Packages

Python packages with the GitHub topic napari. Sorted by relevance, with stars and monthly downloads.
napari
npe2

napari plugin engine v2

143K 19 36
napari
napari

napari: a fast, interactive, multi-dimensional image viewer for python

139K 3K 489
napari
napari-plugin-manager

napari plugin manager to provide a graphical user interface for installing napari plugins.

58K 9 11
4DNucleome
partseg

Tool for segmentation in bioimaging

18K 37 10
scverse
napari-spatialdata

Interactive visualization of spatial omics data

18K 85 23
Kapoorlabs-CAPED
napatrackmater

Napari Visualization tool for Trackmate > 6.0 XML files for 2/3D + time tracks. Available via pip package napatrackmater.

10K 18 3
matplotlib
napari-matplotlib

Linking napari layers with Matplotlib plots

9K 43 23
tlambert03
napari-omero

Browse your OMERO database from within napari.

6K 40 16
haesleinhuepf
napari-skimage-regionprops

Feature extraction for labeled objects in images using regionprops from scikit-image

6K 55 13
hanjinliu
impy-array

Speed up coding/extending image analysis in Python.

3K 37 1
napari
napari-animation

A napari plugin for making animations

2K 96 33
brainglobe
brainreg-segment

Segmentation of anatomical structures in a common coordinate space

2K 36 12
clEsperanto
napari-pyclesperanto-assistant

GPU-accelerated image processing in napari using OpenCL

2K 36 9
AllenCellModeling
napari-aicsimageio

Multiple file format reading directly into napari using pure Python

2K 38 12
brainglobe
brainglobe-segmentation

Segmentation of anatomical structures in a common coordinate space

2K 36 12
jhnnsrs
mikro-napari

napari within the mikro environment

1K 0 0
brisvag
blik

Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.

1K 30 10
brainglobe
cellfinder-napari

Efficient cell detection in large images using cellfinder in napari

1K 22 4
pkosurilab
bellavista

Python package for interactive visualization of imaging-based spatial transcriptomics

1K 7 2
AllenCell
napari-allencell-segmenter

A plugin that enables 3D image segmentation provided by Allen Institute for Cell Science

1K 19 8
BioimageAnalysisCoreWEHI
lls-core

Napari plugin for custom analysis and visualization of lattice lightsheet and Oblique Plane Microscopy data. The plugin is optimized for data from the Zeiss lattice lightsheet microscope.

1K 14 6
stardist
stardist-napari

Object Detection with Star-convex Shapes

797 39 10
Mouseland
cellpose-napari

napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool

763 63 26
InsightSoftwareConsortium
itk-napari-conversion

Convert between itk and napari data structures.

652 4 1