Nwb Python Packages

pynwb

A Python API for working with Neurodata stored in the NWB Format

nwbinspector

Tool to help inspect NWB files for compliance with NWB Best Practices

remfile

File-like object from url of remote file, optimized for use with h5py.

hdmf-docutils

Collection of CLIs, scripts and modules useful to generate HDMF/NWB schema documentation

scitex-dataset

Multi-domain scientific dataset fetcher — neuroscience, biology, pharmacology, medical. Part of SciTeX.

nwbwidgets

This is nwbwidgets, widgets for viewing the contents of a NWB-file in Jupyter Notebooks using ipywidgets.

spyglass-neuro

Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

dlc2nwb

Utilities to convert DeepLabCut (DLC), output to/from Neurodata Without Borders (NWB) format.

jdb-to-nwb

Converts electrophysiology, photometry, and behavioral data for the hex maze task used by the Berke Lab at UCSF to NWB format.

nwb-conversion-tools

Convert data from proprietary formats to NWB format.

nwb-docutils

Collection of CLIs, scripts and modules useful to generate HDMF/NWB schema documentation

neurosift

Browser-based NWB visualization and DANDI exploration

rutishauserlabtonwb

A NWB-based Dataset and Processing Pipeline of Human Single-Neuron Activity During a Declarative Memory Task

ecogvis

Timeseries visualizer for Electrocorticography (ECoG) signals stored in NWB files.

nwb-datajoint

Neuroscience data analysis framework for reproducible research built by Loren Frank Lab at UCSF

hsntools

A module of code for working with HSN as part of the HSNPipeline.

ndx-hed

HED extensions for Neurodata Without Borders (nwb)

buffalo-lab-data-to-nwb

Scripts to convert Buffalo Lab data to the NWB standard

neuroglia

a Python machine learning library for neurophysiology data