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Physiology Python Packages

Python packages with the GitHub topic physiology. Sorted by relevance, with stars and monthly downloads.
neuropsychology
neurokit2

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

120K 2K 518
swharden
pyabf

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

6K 115 36
smoia
phys2cvr

python module to compute cerebrovascular reactivity mapping and other related maps

2K 6 23
physiopy
phys2bids

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

1K 65 49
aaron-schroeder
heartandsole

Python library for analysis of running activity data

984 13 3
physioblocks
physioblocks

Simulation of dynamical models of physiological systems

842 2 1
maximyudayev
pysio-hermes

Heterogeneous Edge Realtime Measurement and Execution System: A Unified Open-Source Framework for Realtime Multimodal Physiological Sensing, Edge AI, and Intervention in Closed-Loop Smart Healthcare Applications

722 11 3
Nikeshbajaj
phyaat

PhyAAt: Physiology of Auditory Attention - Processing Library

608 9 6
CWRUChielLab
axographio

A Python package for reading and writing AxoGraph data files

461 3 2
physiopy
physioqc

Toolbox for physiological data (Automagic) Quality Control

409 3 8
iandanforth
pymuscle

A motor unit based model of skeletal muscle and fatigue

391 69 7
physiopy
peakdet

Toolbox for physiological peak detection analyses. Soon to be deprecated in favour of prep4phys

377 28 21
neuropsychology
neurokit

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).

344 385 102
GiacomoValliPhD
openhdemg

A powerful toolbox for the analysis of HD-EMG recordings

302 60 11
Gabrock94
pysiology

A Python package for physyological's signals processing

282 73 7
neuropsychology
neurokit2cw

The Python Toolbox for Neurophysiological Signal Processing. Versão editada CardioWEB

274 2K 518
maximyudayev
pysio-hermes-pupillabs

Pupil Labs Core smartglasses support module for HERMES

206 0 0
physiopy
physutils

Common tools for the physiopy suite

203 1 4
maximyudayev
pysio-hermes-mvn

Xsens MVN Analyze support module for HERMES

194 0 0
maximyudayev
pysio-hermes-dots

Movella DOTs IMUs support module for HERMES

177 0 0
physiopy
phys2denoise

A collection of scripts to prepare physiological data for fMRI denoising

174 10 21
maximyudayev
pysio-hermes-torch

A PyTorch processing support module for HERMES

162 0 0
maximyudayev
pysio-hermes-basler

Basler GigE camera support module for HERMES

129 0 0
maximyudayev
pysio-hermes-tmsi

TMSi SAGA support module for HERMES

129 0 0
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