Physiology Python Packages

neurokit2

NeuroKit2: The Python Toolbox for Neurophysiological Signal Processing

120K 2K 518

pyabf

pyABF is a Python package for reading electrophysiology data from Axon Binary Format (ABF) files

6K 115 36

phys2cvr

python module to compute cerebrovascular reactivity mapping and other related maps

2K 6 23

phys2bids

Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

1K 65 49

heartandsole

Python library for analysis of running activity data

984 13 3

physioblocks

Simulation of dynamical models of physiological systems

842 2 1

pysio-hermes

Heterogeneous Edge Realtime Measurement and Execution System: A Unified Open-Source Framework for Realtime Multimodal Physiological Sensing, Edge AI, and Intervention in Closed-Loop Smart Healthcare Applications

722 11 3

phyaat

PhyAAt: Physiology of Auditory Attention - Processing Library

608 9 6

axographio

A Python package for reading and writing AxoGraph data files

461 3 2

physioqc

Toolbox for physiological data (Automagic) Quality Control

409 3 8

pymuscle

A motor unit based model of skeletal muscle and fatigue

391 69 7

peakdet

Toolbox for physiological peak detection analyses. Soon to be deprecated in favour of prep4phys

377 28 21

neurokit

A Python Toolbox for Statistics and Neurophysiological Signal Processing (EEG, EDA, ECG, EMG...).

344 385 102

openhdemg

A powerful toolbox for the analysis of HD-EMG recordings

302 60 11

pysiology

A Python package for physyological's signals processing

282 73 7

neurokit2cw

The Python Toolbox for Neurophysiological Signal Processing. Versão editada CardioWEB

274 2K 518

pysio-hermes-pupillabs

Pupil Labs Core smartglasses support module for HERMES

206 0 0

physutils

Common tools for the physiopy suite

203 1 4

pysio-hermes-mvn

Xsens MVN Analyze support module for HERMES

194 0 0

pysio-hermes-dots

Movella DOTs IMUs support module for HERMES

177 0 0

phys2denoise

A collection of scripts to prepare physiological data for fMRI denoising

174 10 21

pysio-hermes-torch

A PyTorch processing support module for HERMES

162 0 0

pysio-hermes-basler

Basler GigE camera support module for HERMES

129 0 0

pysio-hermes-tmsi

TMSi SAGA support module for HERMES

129 0 0