Reproducible Science Python Packages

pystow

👜 Easily pick a place to store data for your Python code.

hydra-zen

Create powerful Hydra applications without the yaml files and boilerplate code.

sacred

Sacred is a tool to help you configure, organize, log and reproduce experiments developed at IDSIA.

accelerator

The Accelerator is a tool for fast and reproducible processing of eBay-scale datasets on a single computer.

itkwasm

High performance spatial analysis in a web browser and across programming languages and hardware architectures

itkwasm-downsample

High performance spatial analysis in a web browser and across programming languages and hardware architectures

itkwasm-downsample-wasi

High performance spatial analysis in a web browser and across programming languages and hardware architectures

calkit-python

Research project management and automation.

reprozip

ReproZip is a tool that simplifies the process of creating reproducible experiments from command-line executions, a frequently-used common denominator in computational science.

calk9

Research project management and automation.

itkwasm-image-io

High performance spatial analysis in a web browser and across programming languages and hardware architectures

itkwasm-image-io-wasi

High performance spatial analysis in a web browser and across programming languages and hardware architectures

dawgz

Unleash the true power of scheduling

configgle

Type-safe hierarchical experiment configuration using pure Python dataclass factories and dependency injection.

seamless-transformer

Computation engine for Seamless: execute checksum-addressed transformations in Python or bash

itk-webassemblyinterface

High performance spatial analysis in a web browser and across programming languages and hardware architectures

seamless-suite

Wrap Python functions and shell commands as content-addressed transformations. Cache results, run them locally or on a cluster, and share them by checksum.

synesis

Synesis is a Domain-Specific Language (DSL) compiler that transforms qualitative research annotations into canonical knowledge structures.

seamless-config

Configuration layer and cluster/remote selection tooling for Seamless

smartrun

Run any Python script in a clean, disposable virtual environment — automatically.

itkwasm-compare-images

High performance spatial analysis in a web browser and across programming languages and hardware architectures

aspecd

Python framework for handling spectroscopic data focussing on reproducibility

itkwasm-dicom-wasi

No description available

itkwasm-compare-images-wasi

High performance spatial analysis in a web browser and across programming languages and hardware architectures