Scientific Python Packages

ert

ERT - Ensemble based Reservoir Tool - is designed for running ensembles of dynamical models such as reservoir models, in order to do sensitivity analysis and data assimilation. ERT supports data assimilation using the Ensemble Smoother (ES) and Ensemble Smoother with Multiple Data Assimilation (ES-MDA).

scirs2

SciRS2: A comprehensive scientific computing library in Rust - Python bindings (SciPy alternative) with async support and pandas integration

magpylib

Python package for computation of magnetic fields of magnets, currents and moments.

allensdk

code for reading and processing Allen Institute for Brain Science data

xrayutilities

xrayutilities - a package with useful scripts for X-ray diffraction physicists

quickgraphlib

A scientific graphing library for QtQuick

pandastable

Table analysis in Tkinter using pandas DataFrames.

codemetapy

A Python package for generating and working with codemeta

cellxgene

An interactive explorer for single-cell transcriptomics data

unittestersg

UnitTesterSG is for unit testing scientific/engineering outputs. It accommodates nested and even staggered array type structures, and mixed data types (like strings and integers etc). It also enables you to set numerical and absolute tolerances. Compatible with pytest.

magpylib-material-response

Python package extending the Magpylib library by providing magnetic field analysis for soft materials and demagnetization of hard magnets.

autolab

Python package for laboratory instruments control and scientific experiments automation

csdmpy

The Core Scientific Dataset Model (CSDM): A versatile and light-weight file-format for scientific datasets.

circuitpython-uplot

Small framework to create graphics in CircuitPython

cellxgene-gateway

Cellxgene Gateway allows you to use the Cellxgene Server provided by the Chan Zuckerberg Institute (https://github.com/chanzuckerberg/cellxgene) with multiple datasets.

crikit2

CRIKit2 is a hyperspectral imaging toolkit formerly known as the coherent Raman imaging toolkit.

hardwarelibrary

A simple application-oriented and device-oriented library with a variety of communication ports for controlling devices (POSIX serial, USB, etc...)

anomalytics

The ultimate anomaly detection library.

googlescholarreport

collect article related data from google scholar

pyvaporation

The solution for modelling pervaporation membrane performance based on experimental data

pyaurn

A Python module to import data from the UK Automatic Urban Rural Network (air pollution monitoring network)

pdebench

PDEBench: An Extensive Benchmark for Scientific Machine Learning

usit

Python package for laboratory instruments control and scientific experiments automation

skultrafast

Python package for analyzing time-resolved spectra.