19 dependents
Package Description Downloads/month
A plugin to read, write, and manage image data in napari 3K
A napari plugin for counting organoids from brightfield microscopy images with d... 2K
Collection of representation learning models, techniques, callbacks, utils, used... 2K
python3 physicell data output loader. 2K
Using OME specifications with Apache Arrow for fast, queryable, and language agn... 1K
A project to read microscopy files. 1K
Napari plugin for custom analysis and visualization of lattice lightsheet and Ob... 1K
Python package for deep learning based image to image transformation 812
Quantifying senescence, the easy way. 769
Leonardo: an LSFM image processing toolset 411
A plugin that enables annotations provided by Allen Institute for Cell Science 410
Python Calcium Recording Analysis and Inference Toolbox 310
A collection of Python scripts for iSCAT microscopy data analysis 274
PixelPatrol add-on package for loading images with bioio and zarr 260
This package makes easy to replicate figures and movies from microscopy data fro... 242
Lab for quantitative bioimage analysis experiments in Python 175
Sample data for napari-ndev 158
Save multidimensional file as folder of tifs 148
A Python package for analyzing 3D vascular structures from segmentations 91