20 dependents
| Package | Description | Downloads/month |
|---|---|---|
| Python interface to access reference genome features (such as genes, transcripts... | 52K | |
| Predict mutated T-cell epitopes from sequencing data | 17K | |
| A cancer immunotherapy tools suite | 3K | |
| A toolkit of spatial transcriptomic analysis. | 2K | |
| Concise: Keras extension for regulatory genomics | 1K | |
| RNA modifications detection from Nanopore dRNA-Seq data | 1K | |
| Preprocessing for various cancer genomics datasets | 797 | |
| Leaflet is a probabilistic model that identifies latent cell states defined by s... | 698 | |
| Splicing-aware time-course network enricher - exploratory analysis for transcrip... | 666 | |
| Forensic analysis tool useful in backwards computing information from next-gener... | 653 | |
| BioBox CLI for data manipulation in python | 552 | |
| SIRVsuite is a command line tool to QC an RNA-Seq workflow using Lexogen's SIRV ... | 530 | |
| A set of tools to annotate VCF files with expression and readcount data | 522 | |
| OpenOmics provides a bioinformatics API and web-app platform integrate and visua... | 393 | |
| A tool for annotating VCF files with expression and readcount data | 306 | |
| Map between gene, transcript, exon, CDS, and protein coordinates. | 279 | |
| A collection of SBM utility functions | 170 | |
| Python genomic features extractor from raw files. | 159 | |
| Package to performa a variety of genomic analysis | 150 | |
| All about intervals on genomic data | 120 |
