36 dependents
Package Description Downloads/month
Validating external terms 8K
Python package for interacting with Monarch Initiative knowledge graph 7K
Automated assistance for the schema development lifecycle 4K
OntoGPT is a Python package for extracting structured information from text with... 3K
3K
Cell Annotation Schema Tools 3K
Ontology enrichment tool for CxG standard AnnData files. 2K
Update ontologies using change language. 2K
2K
2K
General, open-standard schema for cell annotations 1K
babelon 1K
Python-based non-minimalistic OWL to FHIR converter. 1K
ontology_loader 1K
Convert OMOP vocab into OWL and SemanticSQL. 980
mCodeGPT 448
Crawl github for ontology related issues. 442
Supporting simple queries over ontology annotations in dataframes, using UberGra... 438
The KG-Hub Universalizer provides functions for knowledge graph cleanup and iden... 426
aurelian 409
CurateGPT 362
332
This package validates a list of relationships between two terms against the spe... 327
A collection of commonly used value sets 327
oakx-spacy 310
252
phenio-toolkit 235
OGER plugin for oaklib 230
A model context protocol (MCP) to help agents interact with ontologies and the o... 152
oakx-grape 123
mcodegpthippa 108
Enter description of your project here 71
Generates ASCT table from Ubergraph 63
This package validates a list of relationships between two terms against the spe... 63
57
CancerOntoGPT 23